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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
BLCA rs11990387 chr8:12699556 C/T PCM1 chr8:17780349-17887453:+ -0.76 -6.32 7.45E-10 Box Plot
BLCA rs11990387 chr8:12699556 C/T POLR3D chr8:22102617-22112113:+ -0.78 -6.33 6.99E-10 Box Plot
BLCA rs11990387 chr8:12699556 C/T PPP2R2A chr8:26149007-26230196:+ -0.87 -7.16 4.11E-12 Box Plot
BLCA rs11990387 chr8:12699556 C/T TNKS chr8:9413424-9639856:+ -0.69 -6.47 3.06E-10 Box Plot
BLCA rs11990387 chr8:12699556 C/T UBXN8 chr8:30589764-30624522:+ -0.75 -6.1 2.56E-9 Box Plot
BLCA rs11990387 chr8:12699556 C/T VPS37A chr8:17104080-17159936:+ -0.8 -6.3 8.09E-10 Box Plot
BLCA rs11990387 chr8:12699556 C/T XPO7 chr8:21777182-21864096:+ -0.87 -6.72 6.51E-11 Box Plot
BLCA rs11990446 chr8:8825795 C/G AGPAT5 chr8:6565878-6617187:+ 0.82 8.17 4.43E-15 Box Plot
BLCA rs11990446 chr8:8825795 C/G ATP6V1B2 chr8:20054878-20084330:+ 0.56 6.3 8.07E-10 Box Plot
BLCA rs11990446 chr8:8825795 C/G BIN3 chr8:22477931-22526661:- 0.71 7.43 6.91E-13 Box Plot
BLCA rs11990446 chr8:8825795 C/G C8orf41 chr8:33330904-33370703:- 0.72 6.4 4.41E-10 Box Plot
BLCA rs11990446 chr8:8825795 C/G CCDC25 chr8:27590828-27630170:- 0.81 7.5 4.64E-13 Box Plot
BLCA rs11990446 chr8:8825795 C/G CHMP7 chr8:23101150-23119513:+ 0.85 8.6 2.0E-16 Box Plot
BLCA rs11990446 chr8:8825795 C/G CLN8 chr8:1703944-1749877:+ 0.78 7.02 1.01E-11 Box Plot
BLCA rs11990446 chr8:8825795 C/G CNOT7 chr8:17082473-17104387:- 0.87 8.52 3.62E-16 Box Plot